Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13605

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,102,306	-		BPHYT_RS13600	0.80	+0.5
3,102,350	-		BPHYT_RS13600	0.87	-1.5
3,102,390	-				-0.3
3,102,390	-				+1.6
3,102,474	+				-0.1
3,102,517	+				-0.9
3,102,517	+				+0.3
3,102,519	+				-2.5
3,102,529	-				+0.1
3,102,643	+				+0.5
3,102,761	+				-0.6
3,102,780	+				-1.5
3,102,780	+				+0.6
3,102,781	-				-0.7
3,102,837	-				+0.9
3,102,905	+				-0.1
3,102,921	-				+1.3
3,103,155	-				-1.8
3,103,214	-		BPHYT_RS13605	0.66	-2.4
3,103,256	-				+0.3
3,103,256	-				+0.5
3,103,325	-				+2.4
3,103,500	-		BPHYT_RS13610	0.48	-1.6
3,103,548	-		BPHYT_RS13610	0.59	-0.1
3,103,551	-		BPHYT_RS13610	0.60	+2.4
3,103,551	-		BPHYT_RS13610	0.60	+1.4
3,103,665	-		BPHYT_RS13610	0.87	-0.9
3,104,177	+				+1.8