Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13470

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,074,153	-		BPHYT_RS13460	0.84	-0.4
3,074,423	+				+0.2
3,074,563	-		BPHYT_RS13465	0.31	+0.5
3,074,631	+		BPHYT_RS13465	0.49	+1.6
3,074,632	-		BPHYT_RS13465	0.49	-0.2
3,074,765	-		BPHYT_RS13465	0.84	+0.1
3,074,839	+				-0.2
3,075,022	+		BPHYT_RS13470	0.29	-1.6
3,075,257	-				+0.0
3,075,259	-				-1.6
3,075,350	+				-0.1
3,075,688	-		BPHYT_RS13475	0.17	-1.7
3,075,861	+		BPHYT_RS13475	0.27	+0.2
3,075,867	+		BPHYT_RS13475	0.28	-0.6
3,075,868	-		BPHYT_RS13475	0.28	-0.5
3,076,093	+		BPHYT_RS13475	0.42	+0.1
3,076,249	-		BPHYT_RS13475	0.52	+0.1