Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10165

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,315,404	-				-0.2
2,315,511	+				+1.1
2,315,511	+				+4.4
2,315,512	-				-0.9
2,315,512	-				-0.2
2,315,640	-				+0.0
2,315,640	-				-0.2
2,315,660	-				-0.8
2,315,727	+				-0.1
2,315,728	-				-0.4
2,315,728	-				-1.3
2,316,232	+		BPHYT_RS10165	0.46	-1.0
2,316,276	+		BPHYT_RS10165	0.56	+0.1
2,316,652	+		BPHYT_RS10170	0.11	-0.8
2,316,654	+		BPHYT_RS10170	0.11	+0.2
2,316,685	+		BPHYT_RS10170	0.15	-1.3
2,316,687	+		BPHYT_RS10170	0.15	-0.7
2,316,919	+		BPHYT_RS10170	0.42	-0.3
2,316,919	+		BPHYT_RS10170	0.42	+1.1
2,316,919	+		BPHYT_RS10170	0.42	-0.0
2,317,070	+		BPHYT_RS10170	0.59	+0.1
2,317,070	+		BPHYT_RS10170	0.59	-0.8
2,317,070	+		BPHYT_RS10170	0.59	+1.6
2,317,096	+		BPHYT_RS10170	0.62	-1.0