Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10125

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,304,998	+				-1.7
2,304,998	+				-0.4
2,304,999	-				-0.2
2,305,102	+				+0.0
2,305,102	+				+0.1
2,305,196	+				+0.5
2,305,261	+		BPHYT_RS10120	0.12	-1.7
2,305,262	-		BPHYT_RS10120	0.12	-0.4
2,305,262	-		BPHYT_RS10120	0.12	-1.1
2,305,262	-		BPHYT_RS10120	0.12	+0.9
2,305,806	+				-1.5
2,306,194	+		BPHYT_RS10125	0.63	-1.3
2,306,478	-				+0.1
2,306,478	-				+0.2
2,306,702	-				-0.6
2,306,846	+				+0.3
2,307,012	+				+0.4
2,307,031	-				+0.4
2,307,119	+		BPHYT_RS10130	0.26	-0.6
2,307,247	-				+1.0