Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09085

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,055,023	-		BPHYT_RS09080	0.17	-0.5
2,055,023	-		BPHYT_RS09080	0.17	-2.0
2,055,135	+		BPHYT_RS09080	0.27	-0.7
2,055,238	+		BPHYT_RS09080	0.37	-1.5
2,055,238	+		BPHYT_RS09080	0.37	-0.1
2,055,239	-		BPHYT_RS09080	0.37	-1.3
2,055,493	-		BPHYT_RS09080	0.62	-0.1
2,055,529	-		BPHYT_RS09080	0.65	-1.2
2,055,547	+		BPHYT_RS09080	0.67	-1.4
2,055,548	-		BPHYT_RS09080	0.67	+0.3
2,055,548	-		BPHYT_RS09080	0.67	-0.7
2,055,676	+		BPHYT_RS09080	0.79	-0.0
2,055,700	+		BPHYT_RS09080	0.82	+0.4
2,055,700	+		BPHYT_RS09080	0.82	-0.0
2,056,163	-		BPHYT_RS09085	0.18	-0.8
2,056,224	+		BPHYT_RS09085	0.26	-2.3
2,056,268	-		BPHYT_RS09085	0.31	+0.8
2,056,268	-		BPHYT_RS09085	0.31	-0.6
2,056,268	-		BPHYT_RS09085	0.31	+0.1
2,056,800	-				+0.1
2,056,829	+				+0.1
2,056,865	-				-1.3
2,057,112	-		BPHYT_RS09090	0.26	+1.0
2,057,235	-		BPHYT_RS09090	0.40	+0.1
2,057,366	+		BPHYT_RS09090	0.56	-1.2
2,057,494	+		BPHYT_RS09090	0.72	-0.1
2,057,495	-		BPHYT_RS09090	0.72	+3.2
2,057,537	+		BPHYT_RS09090	0.77	+0.8
2,057,538	-		BPHYT_RS09090	0.77	+1.0
2,057,602	+		BPHYT_RS09090	0.85	+1.6
2,057,603	-		BPHYT_RS09090	0.85	+1.8
2,057,603	-		BPHYT_RS09090	0.85	-1.8