Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08610

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,962,880	+				+0.8
1,962,903	+				-0.1
1,962,903	+				+0.3
1,962,904	-				+1.4
1,962,904	-				-0.4
1,962,904	-				-0.8
1,963,012	-		BPHYT_RS08600	0.28	-0.8
1,963,561	+				-0.2
1,963,562	-				-0.1
1,963,684	+				+1.0
1,963,685	-				+2.0
1,963,705	+				-1.4
1,963,705	+				+0.5
1,963,709	+				+0.8
1,963,710	-				-0.6
1,963,830	+				-1.1
1,963,885	+		BPHYT_RS08610	0.13	-0.7
1,963,886	-		BPHYT_RS08610	0.13	-2.1
1,963,886	-		BPHYT_RS08610	0.13	+1.1
1,963,960	+		BPHYT_RS08610	0.40	+0.7
1,963,960	+		BPHYT_RS08610	0.40	-1.0
1,963,961	-		BPHYT_RS08610	0.40	-0.4
1,964,010	+		BPHYT_RS08610	0.58	-0.6
1,964,011	-		BPHYT_RS08610	0.58	-0.1
1,964,099	-		BPHYT_RS08610	0.90	-1.0
1,964,232	-				-2.2
1,964,439	+		BPHYT_RS08615	0.47	+0.6
1,964,631	+				+1.4