Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08500
Experiment: 36hr PHYTO4 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO4 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 1,944,550 | + | BPHYT_RS08495 | 0.68 | -0.1 | |
| 1,944,550 | + | BPHYT_RS08495 | 0.68 | -0.0 | |
| 1,945,481 | - | -0.0 | |||
| 1,945,949 | - | BPHYT_RS08500 | 0.47 | -0.2 | |
| 1,946,086 | + | BPHYT_RS08500 | 0.60 | +0.3 | |
| 1,946,086 | + | BPHYT_RS08500 | 0.60 | +0.1 | |
| 1,946,087 | - | BPHYT_RS08500 | 0.60 | +1.3 | |
| 1,946,087 | - | BPHYT_RS08500 | 0.60 | -0.2 | |
| 1,946,115 | - | BPHYT_RS08500 | 0.62 | -1.0 | |
| 1,946,776 | - | BPHYT_RS08505 | 0.24 | +0.1 | |
| 1,946,776 | - | BPHYT_RS08505 | 0.24 | -2.2 | |
| 1,947,012 | + | BPHYT_RS08505 | 0.46 | -0.1 |
Or see this region's nucleotide sequence