Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08495

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,942,308	+				+1.4
1,943,339	-		BPHYT_RS08495	0.22	+0.8
1,943,531	+		BPHYT_RS08495	0.29	-0.3
1,943,578	-		BPHYT_RS08495	0.31	-2.8
1,943,623	-		BPHYT_RS08495	0.33	+0.1
1,943,623	-		BPHYT_RS08495	0.33	-1.1
1,943,625	-		BPHYT_RS08495	0.33	-2.2
1,943,832	+		BPHYT_RS08495	0.41	-0.9
1,943,847	+		BPHYT_RS08495	0.41	-0.0
1,943,847	+		BPHYT_RS08495	0.41	-0.4
1,943,963	-		BPHYT_RS08495	0.46	+1.1
1,944,550	+		BPHYT_RS08495	0.68	-0.1
1,944,550	+		BPHYT_RS08495	0.68	-0.0
1,945,481	-				-0.0
1,945,949	-		BPHYT_RS08500	0.47	-0.2
1,946,086	+		BPHYT_RS08500	0.60	+0.3
1,946,086	+		BPHYT_RS08500	0.60	+0.1
1,946,087	-		BPHYT_RS08500	0.60	+1.3
1,946,087	-		BPHYT_RS08500	0.60	-0.2
1,946,115	-		BPHYT_RS08500	0.62	-1.0