Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07995

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,824,090	+		BPHYT_RS07985	0.48	+1.8
1,824,430	-				-2.6
1,824,482	-				-0.8
1,824,543	+				+0.9
1,824,543	+				+0.4
1,824,544	-				-0.3
1,824,544	-				-0.1
1,824,544	-				-1.4
1,824,587	+				+0.3
1,825,134	-				+0.1
1,825,214	+		BPHYT_RS07995	0.12	+0.1
1,825,215	-		BPHYT_RS07995	0.12	-0.6
1,825,250	+		BPHYT_RS07995	0.15	-0.5
1,825,251	-		BPHYT_RS07995	0.15	-1.1
1,825,407	-		BPHYT_RS07995	0.27	-0.8
1,825,407	-		BPHYT_RS07995	0.27	-1.0
1,825,892	-		BPHYT_RS07995	0.66	-1.4
1,826,168	+		BPHYT_RS07995	0.88	-0.8
1,826,218	-				-0.1
1,826,218	-				-1.2
1,826,316	+				-0.8
1,826,432	-				-0.7
1,826,499	-				+0.6
1,826,530	+				-0.3
1,826,681	+				-0.6
1,826,987	+		BPHYT_RS08000	0.40	+0.8
1,826,987	+		BPHYT_RS08000	0.40	-0.0
1,827,098	-		BPHYT_RS08000	0.78	-2.2
1,827,175	+				-0.2
1,827,185	+				+0.5