Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07875

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,792,887	-		BPHYT_RS07870	0.46	-0.9
1,792,986	-		BPHYT_RS07870	0.59	-0.4
1,793,259	-				-1.8
1,793,443	-				+0.2
1,793,443	-				-0.7
1,793,446	+				-0.4
1,793,449	-				+0.0
1,793,449	-				-0.3
1,793,449	-				-1.7
1,793,449	-				-0.2
1,793,746	-		BPHYT_RS07875	0.17	-0.9
1,793,964	+		BPHYT_RS07875	0.28	-2.5
1,793,964	+		BPHYT_RS07875	0.28	-0.2
1,793,964	+		BPHYT_RS07875	0.28	+0.1
1,793,965	-		BPHYT_RS07875	0.28	+0.9
1,793,994	+		BPHYT_RS07875	0.30	+0.0
1,794,083	-		BPHYT_RS07875	0.34	+2.0
1,794,264	+		BPHYT_RS07875	0.43	-1.0
1,794,279	+		BPHYT_RS07875	0.44	+1.5
1,794,837	+		BPHYT_RS07875	0.72	+0.6
1,794,838	-		BPHYT_RS07875	0.72	-0.4
1,794,838	-		BPHYT_RS07875	0.72	-1.5
1,794,838	-		BPHYT_RS07875	0.72	-0.7
1,794,937	+		BPHYT_RS07875	0.77	-0.4
1,794,937	+		BPHYT_RS07875	0.77	+1.7
1,795,023	+		BPHYT_RS07875	0.81	-1.7
1,795,023	+		BPHYT_RS07875	0.81	+0.8
1,795,023	+		BPHYT_RS07875	0.81	-0.6
1,795,024	-		BPHYT_RS07875	0.81	-0.5
1,795,438	+				+0.3
1,795,439	-				-2.2
1,795,492	-				+0.6
1,795,549	+				-1.4
1,795,721	+				-0.4
1,795,721	+				-0.1
1,795,722	-				+0.2
1,795,722	-				+0.1
1,795,901	+				-0.4
1,795,928	+				+0.3
1,795,929	-				+0.4
1,795,929	-				-1.1