Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04395

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,012,762	-				+0.2
1,012,814	+				-0.5
1,012,815	-				+0.7
1,012,815	-				-0.4
1,012,937	+				+0.4
1,012,941	+				+0.1
1,013,140	+				+1.4
1,013,140	+		BPHYT_RS04395	0.13	-0.8
1,013,233	+		BPHYT_RS04395	0.19	-1.1
1,013,233	+		BPHYT_RS04395	0.19	+0.1
1,013,373	+		BPHYT_RS04395	0.28	-0.5
1,013,401	+		BPHYT_RS04395	0.30	-0.8
1,013,401	+		BPHYT_RS04395	0.30	-0.6
1,014,513	+				-0.9
1,014,551	+				+3.4
1,014,588	-				-0.4
1,014,699	-				-1.7
1,014,833	+				+0.1
1,014,834	-				+1.6
1,014,847	+				+0.3
1,014,847	+				-1.8
1,014,848	-				+1.0
1,014,848	-				+0.7
1,014,848	-				+1.5
1,014,908	+				-0.4
1,014,910	+				-0.5
1,015,046	-				+0.2
1,015,189	-				-0.6
1,015,211	+				-2.0
1,015,243	+				+0.1
1,015,354	-		BPHYT_RS04400	0.20	-1.1