Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS00635

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
150,060	+		BPHYT_RS00630	0.15	-1.1
150,276	-		BPHYT_RS00630	0.35	-0.1
150,450	+		BPHYT_RS00630	0.51	-0.7
150,450	+		BPHYT_RS00630	0.51	-0.1
150,617	+		BPHYT_RS00630	0.67	-0.4
150,617	+		BPHYT_RS00630	0.67	+1.5
150,617	+		BPHYT_RS00630	0.67	+1.1
150,617	+		BPHYT_RS00630	0.67	+0.9
150,617	+		BPHYT_RS00630	0.67	-1.0
150,618	-		BPHYT_RS00630	0.67	+0.1
150,823	+		BPHYT_RS00630	0.87	+0.0
150,920	+				-0.6
150,921	-				+0.5
151,020	+		BPHYT_RS00635	0.10	-0.1
151,021	-		BPHYT_RS00635	0.10	-2.1
151,021	-		BPHYT_RS00635	0.10	-0.8
151,118	+		BPHYT_RS00635	0.27	-0.2
151,119	-		BPHYT_RS00635	0.27	-1.6
151,119	-				-0.3
151,591	-				+1.4
151,591	-				-1.2
151,591	-				+0.9
151,591	-				+0.0
151,702	+				+0.0
151,702	+				-0.1
151,703	-				-0.1
151,783	-		BPHYT_RS00640	0.17	+0.7
151,833	+		BPHYT_RS00640	0.22	-0.5
151,833	+				+1.2
151,833	+		BPHYT_RS00640	0.22	+0.4
151,834	-		BPHYT_RS00640	0.22	+0.7
151,933	+		BPHYT_RS00640	0.31	-1.3
151,990	+		BPHYT_RS00640	0.36	-0.2
151,990	+		BPHYT_RS00640	0.36	-1.2
151,991	-		BPHYT_RS00640	0.36	-1.0
152,070	-		BPHYT_RS00640	0.44	+1.2
152,099	-		BPHYT_RS00640	0.46	+2.6
152,099	-		BPHYT_RS00640	0.46	+0.2
152,144	-		BPHYT_RS00640	0.50	-0.2
152,166	+		BPHYT_RS00640	0.52	-0.3
152,309	-		BPHYT_RS00640	0.65	+0.5
152,309	-		BPHYT_RS00640	0.65	-0.2
152,318	+		BPHYT_RS00640	0.66	+0.6
152,319	-		BPHYT_RS00640	0.66	-0.7
152,351	-		BPHYT_RS00640	0.69	-1.3