Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35765

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,612,349	+		BPHYT_RS35760	0.21	+0.3
3,612,349	+		BPHYT_RS35760	0.21	-0.0
3,612,540	+		BPHYT_RS35760	0.40	-0.3
3,612,698	+		BPHYT_RS35760	0.55	-0.5
3,612,771	-		BPHYT_RS35760	0.62	-0.7
3,612,822	+		BPHYT_RS35760	0.67	-1.0
3,612,838	-		BPHYT_RS35760	0.69	+0.0
3,613,084	-				-0.9
3,613,084	-				-0.4
3,613,169	-				-0.1
3,613,395	-				+2.6
3,613,610	+		BPHYT_RS35765	0.21	-3.3
3,613,616	+		BPHYT_RS35765	0.21	-1.9
3,613,617	-		BPHYT_RS35765	0.21	-0.4
3,613,786	-		BPHYT_RS35765	0.30	-1.0
3,613,952	-		BPHYT_RS35765	0.39	-2.3
3,614,580	-		BPHYT_RS35765	0.72	+0.3
3,614,681	-		BPHYT_RS35765	0.77	-1.1
3,615,375	-		BPHYT_RS35770	0.31	-0.8
3,615,682	-		BPHYT_RS35770	0.87	-0.5