Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35300

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,518,882	+				+0.7
3,519,136	+		BPHYT_RS35295	0.31	-1.3
3,519,680	-				-0.4
3,519,715	+				+0.3
3,519,716	-				+0.3
3,519,875	-				-0.1
3,519,875	-				-0.1
3,520,314	+		BPHYT_RS35300	0.74	-1.3
3,520,386	+		BPHYT_RS35300	0.87	-1.1
3,520,387	-		BPHYT_RS35300	0.87	-0.9
3,520,489	+				-0.2
3,520,490	-				-1.4
3,520,490	-				-0.3
3,520,490	-				+0.5
3,520,558	+		BPHYT_RS35305	0.21	-1.8
3,520,581	+		BPHYT_RS35305	0.28	-0.4
3,520,581	+		BPHYT_RS35305	0.28	+0.3
3,520,812	+				-1.3
3,520,961	+		BPHYT_RS35310	0.19	+1.4
3,520,962	-		BPHYT_RS35310	0.19	-0.5
3,521,111	+		BPHYT_RS35310	0.50	-0.1
3,521,429	-				+1.1
3,521,429	-				+0.4
3,521,436	-				-1.5