Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS35155

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,490,164	+		BPHYT_RS35150	0.54	-0.5
3,490,253	+		BPHYT_RS35150	0.63	+0.2
3,490,574	-				-1.5
3,490,674	-				-1.3
3,490,807	-				+0.8
3,490,850	-				-0.4
3,490,853	+				-0.5
3,490,854	-				-0.6
3,490,882	+				+0.9
3,490,882	+				+0.8
3,490,915	+				+0.6
3,490,916	-				-0.7
3,491,111	+				-0.0
3,491,112	-				-0.9
3,491,352	+		BPHYT_RS35155	0.13	+0.5
3,491,353	-		BPHYT_RS35155	0.13	-1.9
3,491,495	-		BPHYT_RS35155	0.19	+1.6
3,491,689	+		BPHYT_RS35155	0.28	-1.2
3,491,690	-		BPHYT_RS35155	0.28	+0.2
3,491,727	+		BPHYT_RS35155	0.30	+0.7
3,491,800	+		BPHYT_RS35155	0.33	-1.5
3,491,878	+		BPHYT_RS35155	0.37	+1.2
3,491,878	+		BPHYT_RS35155	0.37	-1.0
3,491,878	+		BPHYT_RS35155	0.37	-1.1
3,491,879	-		BPHYT_RS35155	0.37	-1.4
3,491,879	-		BPHYT_RS35155	0.37	+0.6
3,491,879	-		BPHYT_RS35155	0.37	-0.0
3,491,947	+		BPHYT_RS35155	0.40	+0.2
3,492,238	+		BPHYT_RS35155	0.53	+0.5
3,492,238	+		BPHYT_RS35155	0.53	+0.0
3,492,239	-		BPHYT_RS35155	0.53	-0.5
3,492,330	+		BPHYT_RS35155	0.57	+0.6
3,492,331	-		BPHYT_RS35155	0.57	+0.3
3,492,592	+		BPHYT_RS35155	0.69	+2.6
3,492,619	+		BPHYT_RS35155	0.70	+0.3
3,492,620	-		BPHYT_RS35155	0.70	-0.2
3,492,628	+		BPHYT_RS35155	0.71	+0.2
3,492,628	+		BPHYT_RS35155	0.71	-0.4
3,492,984	+		BPHYT_RS35155	0.87	+0.6
3,493,007	-		BPHYT_RS35155	0.88	+0.5
3,493,048	+		BPHYT_RS35155	0.90	+0.8
3,493,049	-		BPHYT_RS35155	0.90	-0.2
3,493,051	-		BPHYT_RS35155	0.90	+2.5
3,493,099	+				-0.2
3,493,141	+				+0.5
3,493,181	-				+0.9
3,493,183	+				+0.7
3,493,186	+				-0.1
3,493,186	+				+1.3
3,493,187	-				-0.4
3,493,724	-		BPHYT_RS35160	0.56	+0.5
3,493,990	+				-0.6
3,493,991	-				-1.9