Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33660

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,134,854	-		BPHYT_RS33650	0.89	+2.5
3,134,875	-				+1.5
3,135,048	+				-0.7
3,135,048	+				+1.6
3,135,048	+				+0.7
3,135,199	+		BPHYT_RS33655	0.19	-2.1
3,135,200	-		BPHYT_RS33655	0.19	-0.1
3,135,233	-		BPHYT_RS33655	0.27	+1.5
3,135,241	+		BPHYT_RS33655	0.28	-1.1
3,135,241	+		BPHYT_RS33655	0.28	-0.1
3,135,404	-		BPHYT_RS33655	0.64	+0.9
3,135,550	+				+2.5
3,135,551	-				-0.2
3,135,551	-				-0.7
3,135,551	-				-2.7
3,135,562	+				-0.2
3,135,588	+				-0.5
3,135,589	-				-0.1
3,135,751	+				+0.2
3,135,752	-				+0.1
3,136,181	-				+0.0
3,136,324	-				+0.5
3,136,324	-				-0.2
3,136,332	+				+1.2
3,136,333	-				+0.2
3,136,333	-				-0.8
3,136,333	-				-0.3
3,136,336	+				+0.6
3,136,336	+				+0.3
3,136,336	+				-0.7
3,136,337	-				+0.2
3,136,337	-				+0.3
3,136,437	-				+0.3
3,136,440	-				-1.0
3,136,474	-				-1.7
3,136,474	-				-2.0
3,136,602	+		BPHYT_RS33665	0.17	-1.6
3,136,603	-		BPHYT_RS33665	0.17	-0.1
3,136,603	-		BPHYT_RS33665	0.17	+0.2
3,136,634	+		BPHYT_RS33665	0.19	+0.7
3,136,923	-		BPHYT_RS33665	0.38	-0.3
3,137,084	+		BPHYT_RS33665	0.49	-1.3
3,137,084	+		BPHYT_RS33665	0.49	-0.8
3,137,126	+		BPHYT_RS33665	0.52	-1.9
3,137,127	-		BPHYT_RS33665	0.52	+0.2
3,137,127	-		BPHYT_RS33665	0.52	+0.1