Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33585

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,118,743	-				-0.7
3,118,770	-				+0.5
3,118,770	-				+0.5
3,118,770	-				+0.0
3,118,770	-				+0.4
3,118,770	-				-0.3
3,118,770	-				-0.1
3,118,783	-				-0.6
3,118,957	-		BPHYT_RS33580	0.16	-0.4
3,118,957	-		BPHYT_RS33580	0.16	+2.2
3,119,074	-		BPHYT_RS33580	0.29	-0.9
3,119,383	-		BPHYT_RS33580	0.65	-0.1
3,119,394	-				+0.5
3,119,394	-		BPHYT_RS33580	0.66	-0.6
3,119,461	-		BPHYT_RS33580	0.73	-2.7
3,119,461	-		BPHYT_RS33580	0.73	+1.2
3,119,461	-		BPHYT_RS33580	0.73	+0.1
3,119,635	-				-1.7
3,119,696	-				-1.7
3,119,696	-				+1.8
3,119,696	-				+1.5
3,119,696	-				+1.0
3,119,734	-		BPHYT_RS33585	0.14	-1.2
3,120,005	-				+0.6
3,120,017	-				-2.0
3,120,017	-				+0.6
3,120,183	+				+0.0
3,120,210	+				-1.2
3,120,210	+				-2.2
3,120,228	-				+0.1
3,120,351	-				-0.5
3,120,351	-				-2.0
3,120,411	-		BPHYT_RS33590	0.11	+1.2
3,120,608	+		BPHYT_RS33590	0.29	-0.5
3,120,608	+		BPHYT_RS33590	0.29	-1.0
3,120,609	-		BPHYT_RS33590	0.29	+0.2
3,120,818	+		BPHYT_RS33590	0.48	-1.2
3,120,818	+		BPHYT_RS33590	0.48	-0.3
3,120,818	+		BPHYT_RS33590	0.48	-0.5
3,120,819	-		BPHYT_RS33590	0.48	+0.2
3,120,819	-		BPHYT_RS33590	0.48	-0.1
3,120,857	+		BPHYT_RS33590	0.51	+0.2
3,120,857	+		BPHYT_RS33590	0.51	-1.7
3,120,858	-		BPHYT_RS33590	0.52	+0.1
3,120,935	+		BPHYT_RS33590	0.59	-1.0
3,120,936	-		BPHYT_RS33590	0.59	-0.6
3,120,993	-		BPHYT_RS33590	0.64	-0.1