Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS33275

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,046,659	-				-0.1
3,046,659	-				+0.0
3,046,821	-		BPHYT_RS33270	0.23	+0.7
3,046,979	+		BPHYT_RS33270	0.52	-0.7
3,046,984	-		BPHYT_RS33270	0.53	-1.2
3,046,984	-		BPHYT_RS33270	0.53	+2.0
3,047,047	-		BPHYT_RS33270	0.64	-1.5
3,047,119	+		BPHYT_RS33270	0.78	+0.6
3,047,120	-		BPHYT_RS33270	0.78	-1.9
3,047,120	-		BPHYT_RS33270	0.78	-0.1
3,047,371	+				+0.4
3,047,674	+		BPHYT_RS33275	0.20	+0.9
3,047,720	-		BPHYT_RS33275	0.22	+0.3
3,047,720	-		BPHYT_RS33275	0.22	+1.2
3,048,227	+		BPHYT_RS33275	0.52	+0.2
3,048,596	-		BPHYT_RS33275	0.73	-0.9
3,048,619	+		BPHYT_RS33275	0.74	+0.9
3,048,619	+		BPHYT_RS33275	0.74	+0.3
3,048,620	-		BPHYT_RS33275	0.74	-0.3
3,048,820	+		BPHYT_RS33275	0.86	+0.9
3,048,820	+		BPHYT_RS33275	0.86	+1.8
3,048,821	-		BPHYT_RS33275	0.86	-0.1
3,048,821	-		BPHYT_RS33275	0.86	+0.2
3,049,283	-		BPHYT_RS33280	0.37	-1.8
3,049,444	+				-1.1
3,049,445	-				+0.7
3,049,509	+				-0.5
3,049,509	+				-1.8
3,049,510	-				-1.0
3,049,751	-		BPHYT_RS33285	0.36	-0.9
3,049,869	+		BPHYT_RS33285	0.50	-0.4
3,049,870	-		BPHYT_RS33285	0.51	+0.2
3,049,870	-		BPHYT_RS33285	0.51	-2.3
3,049,870	-		BPHYT_RS33285	0.51	-0.1
3,049,870	-		BPHYT_RS33285	0.51	-0.9
3,049,870	-		BPHYT_RS33285	0.51	-0.0
3,049,870	-		BPHYT_RS33285	0.51	+0.5