Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS32785

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,934,089	+		BPHYT_RS32780	0.55	+0.7
2,934,216	+		BPHYT_RS32780	0.61	+0.4
2,934,216	+		BPHYT_RS32780	0.61	-1.1
2,934,238	+		BPHYT_RS32780	0.62	-0.8
2,934,238	+		BPHYT_RS32780	0.62	-1.6
2,934,239	-		BPHYT_RS32780	0.62	-2.3
2,934,239	-		BPHYT_RS32780	0.62	+0.8
2,934,403	+		BPHYT_RS32780	0.70	+0.1
2,934,464	-		BPHYT_RS32780	0.73	+1.2
2,934,470	-		BPHYT_RS32780	0.73	-1.1
2,934,576	-		BPHYT_RS32780	0.78	-0.1
2,934,794	-		BPHYT_RS32780	0.88	-0.1
2,935,243	+		BPHYT_RS32785	0.74	+0.1
2,935,243	+		BPHYT_RS32785	0.74	-0.6
2,935,243	+		BPHYT_RS32785	0.74	-2.5
2,935,244	-		BPHYT_RS32785	0.75	-1.9
2,935,286	+				-0.4
2,935,383	+				-0.8
2,935,386	+				+0.5
2,935,386	+				-0.3
2,935,387	-				+0.0
2,935,466	+		BPHYT_RS32790	0.17	+0.5
2,935,539	+		BPHYT_RS32790	0.24	-0.4
2,935,812	+		BPHYT_RS32790	0.51	+0.5
2,935,813	-		BPHYT_RS32790	0.51	-0.1