Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31545

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,630,085	-		BPHYT_RS31540	0.50	-1.5
2,630,546	-		BPHYT_RS31540	0.85	-0.2
2,630,548	-		BPHYT_RS31540	0.85	-1.8
2,630,685	-				+0.7
2,630,781	-				+0.2
2,631,318	-		BPHYT_RS31545	0.67	-1.7
2,631,423	+		BPHYT_RS31545	0.82	+0.0
2,631,424	-		BPHYT_RS31545	0.83	+1.4
2,631,424	-		BPHYT_RS31545	0.83	-0.5
2,631,424	-		BPHYT_RS31545	0.83	-1.9
2,631,456	+		BPHYT_RS31545	0.87	-1.0
2,631,539	+				-0.5
2,631,542	-				-0.5
2,631,542	-				+2.6
2,631,542	-				+1.0
2,631,653	+				-1.0
2,631,654	-				+1.6
2,631,833	-				-0.9
2,632,122	+		BPHYT_RS31550	0.59	+5.4
2,632,123	-		BPHYT_RS31550	0.60	+1.8
2,632,137	-		BPHYT_RS31550	0.66	+1.2
2,632,155	+		BPHYT_RS31550	0.73	-0.7
2,632,223	-				-0.5
2,632,449	+				-0.7
2,632,449	+				+1.4
2,632,450	-				+0.4