Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31270

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,572,130	+				+0.1
2,572,254	+				+1.1
2,572,915	+				-0.6
2,572,916	-				+0.1
2,572,916	-				+0.7
2,573,176	-				-1.8
2,573,277	+		BPHYT_RS31270	0.14	-0.7
2,573,277	+		BPHYT_RS31270	0.14	-0.1
2,573,277	+		BPHYT_RS31270	0.14	+0.7
2,573,278	-		BPHYT_RS31270	0.14	-0.8
2,573,278	-		BPHYT_RS31270	0.14	+2.7
2,573,788	+		BPHYT_RS31270	0.56	+0.6
2,573,788	+		BPHYT_RS31270	0.56	-0.0
2,573,792	+		BPHYT_RS31270	0.56	-0.2
2,573,971	-		BPHYT_RS31270	0.71	+0.1
2,574,287	+				+0.8
2,574,323	-				+0.3
2,574,323	-				-0.2
2,574,367	-				-0.2
2,574,371	-				+1.7
2,574,437	+				+1.7
2,574,486	-				+1.3
2,574,575	+				-0.7
2,574,576	-				-1.6
2,574,576	-				-0.4
2,574,753	+		BPHYT_RS31275	0.17	+0.4
2,574,753	+		BPHYT_RS31275	0.17	-1.9
2,574,754	-		BPHYT_RS31275	0.17	-2.2
2,574,953	-		BPHYT_RS31275	0.29	+0.4
2,575,052	+		BPHYT_RS31275	0.35	+0.6
2,575,094	+		BPHYT_RS31275	0.38	+1.1
2,575,141	-		BPHYT_RS31275	0.41	+0.1