Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS31100

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,532,035	+				-0.4
2,532,556	+				-0.2
2,532,853	+				-1.6
2,532,942	-				-0.3
2,532,945	+				+0.9
2,533,227	-		BPHYT_RS31100	0.30	+0.3
2,533,376	-		BPHYT_RS31100	0.45	-0.3
2,533,376	-		BPHYT_RS31100	0.45	+0.6
2,533,388	+		BPHYT_RS31100	0.46	-1.4
2,533,389	-		BPHYT_RS31100	0.46	-0.2
2,533,389	-		BPHYT_RS31100	0.46	+1.3
2,533,753	-		BPHYT_RS31100	0.83	-1.3
2,534,201	-				-0.8
2,534,259	-				+0.8
2,534,378	-				+0.9
2,534,865	+		BPHYT_RS31105	0.58	+0.4