Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30260

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,342,548	+		BPHYT_RS30255	0.35	-0.6
2,342,549	-		BPHYT_RS30255	0.35	+1.4
2,342,551	+		BPHYT_RS30255	0.36	+0.1
2,342,977	+				-1.0
2,343,003	+				+0.5
2,343,199	+		BPHYT_RS30260	0.54	+0.2
2,343,202	+		BPHYT_RS30260	0.55	-1.6
2,343,203	-		BPHYT_RS30260	0.55	+0.0
2,343,203	-		BPHYT_RS30260	0.55	+0.8
2,343,253	+		BPHYT_RS30260	0.71	-0.6
2,343,395	-				-0.5
2,343,751	-		BPHYT_RS30265	0.69	-0.6
2,343,885	-				-2.5
2,343,885	-				+2.6
2,343,950	-				+0.6
2,343,966	+				-0.6
2,344,001	+				-1.1
2,344,002	-				-0.5
2,344,074	-				-0.4
2,344,244	+				-0.8