Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29770

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,234,109	+				+0.0
2,234,109	+				-0.7
2,234,109	+				+0.6
2,234,109	+				+0.5
2,234,424	+		BPHYT_RS29770	0.35	+0.5
2,234,425	-		BPHYT_RS29770	0.35	-0.6
2,234,425	-		BPHYT_RS29770	0.35	-1.8
2,235,205	-				+0.6
2,235,207	+				-1.4
2,235,252	-				+0.4
2,235,284	-				-2.1
2,235,621	+		BPHYT_RS29775	0.76	-0.6
2,235,680	+				+0.6
2,235,681	-				-0.8
2,235,750	+				+0.2
2,236,005	+		BPHYT_RS29780	0.44	-1.2
2,236,104	+		BPHYT_RS29780	0.60	+2.5
2,236,105	-		BPHYT_RS29780	0.60	+0.1
2,236,105	-		BPHYT_RS29780	0.60	+0.2
2,236,140	+		BPHYT_RS29780	0.65	+0.0
2,236,140	+		BPHYT_RS29780	0.65	+0.4
2,236,141	-		BPHYT_RS29780	0.66	-1.1