Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS29755

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,228,749	-		BPHYT_RS29750	0.90	+2.6
2,228,749	-		BPHYT_RS29750	0.90	+0.4
2,228,929	+				-0.4
2,228,929	+				-0.3
2,228,933	+				+1.2
2,228,934	-				-0.1
2,228,934	-				-0.2
2,228,965	+				+0.8
2,228,966	-				-0.1
2,229,451	+				+0.5
2,229,693	-		BPHYT_RS29755	0.11	+1.6
2,229,693	-		BPHYT_RS29755	0.11	+0.3
2,229,788	+		BPHYT_RS29755	0.17	-2.0
2,229,947	+		BPHYT_RS29755	0.27	+1.8
2,229,947	+		BPHYT_RS29755	0.27	+1.1
2,229,947	+		BPHYT_RS29755	0.27	-1.0
2,229,948	-		BPHYT_RS29755	0.27	+2.6
2,229,996	-		BPHYT_RS29755	0.30	+2.9
2,230,025	+		BPHYT_RS29755	0.32	-0.6
2,230,043	+		BPHYT_RS29755	0.33	-2.3
2,230,043	+		BPHYT_RS29755	0.33	+0.5
2,230,043	+		BPHYT_RS29755	0.33	-1.2
2,230,043	+		BPHYT_RS29755	0.33	+2.0
2,230,044	-		BPHYT_RS29755	0.33	-0.7
2,230,044	-		BPHYT_RS29755	0.33	-1.2
2,230,044	-		BPHYT_RS29755	0.33	-1.3
2,230,044	-		BPHYT_RS29755	0.33	-1.2
2,230,099	+		BPHYT_RS29755	0.37	+1.4
2,230,099	+		BPHYT_RS29755	0.37	-1.1
2,230,154	-		BPHYT_RS29755	0.40	-0.1
2,231,338	-				+1.5
2,231,338	-				-0.4
2,231,502	+				-1.0
2,231,680	+				+0.6
2,231,683	+				-0.2
2,231,684	-				+1.6
2,231,684	-				-0.1
2,231,960	+				-0.6
2,231,960	+				+0.6
2,231,962	+				-1.0