Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS28535

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,957,266	-				+1.6
1,957,837	-		BPHYT_RS28530	0.74	-0.3
1,958,100	+				-1.2
1,958,466	-		BPHYT_RS28535	0.57	-1.1
1,958,749	-				+0.3
1,958,800	+				-0.2
1,958,800	+				+0.7
1,958,803	-				-0.0
1,959,017	-		BPHYT_RS28540	0.24	+0.8
1,959,017	-				+1.7
1,959,250	-		BPHYT_RS28540	0.44	+0.3
1,959,264	+		BPHYT_RS28540	0.45	-0.7
1,959,373	-		BPHYT_RS28540	0.54	+0.8
1,959,453	+		BPHYT_RS28540	0.61	+0.8
1,959,472	-		BPHYT_RS28540	0.63	+3.2
1,959,546	+		BPHYT_RS28540	0.69	-0.2
1,959,652	+		BPHYT_RS28540	0.79	-0.8