Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS27880

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,817,330	+		BPHYT_RS27875	0.24	-1.8
1,817,331	-		BPHYT_RS27875	0.24	-1.7
1,817,382	-		BPHYT_RS27875	0.35	+2.5
1,817,646	+				+0.8
1,817,646	+				+0.0
1,817,649	+				-0.4
1,818,096	+				-0.4
1,818,376	-				-1.4
1,818,718	-		BPHYT_RS27880	0.15	-0.7
1,819,214	-		BPHYT_RS27880	0.30	-0.2
1,819,215	+		BPHYT_RS27880	0.30	-0.0
1,819,216	-		BPHYT_RS27880	0.30	+0.2
1,819,390	+		BPHYT_RS27880	0.36	-0.8
1,819,391	-		BPHYT_RS27880	0.36	-1.3
1,819,893	-		BPHYT_RS27880	0.52	+0.3
1,820,586	+		BPHYT_RS27880	0.73	-1.6
1,820,587	-		BPHYT_RS27880	0.73	+0.2
1,821,283	+				-1.3
1,821,570	-				-0.8
1,822,417	+		BPHYT_RS27890	0.63	+1.8