Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26440

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,502,942	+		BPHYT_RS26435	0.77	-0.6
1,502,952	+		BPHYT_RS26435	0.78	+0.2
1,503,104	+				+0.0
1,503,777	-				-0.7
1,503,941	+		BPHYT_RS26440	0.18	-1.2
1,504,417	-		BPHYT_RS26440	0.60	-1.6
1,504,420	+		BPHYT_RS26440	0.60	-0.5
1,504,420	+		BPHYT_RS26440	0.60	+0.8
1,504,420	+		BPHYT_RS26440	0.60	-1.0
1,504,420	+		BPHYT_RS26440	0.60	-0.3
1,504,421	-		BPHYT_RS26440	0.60	+0.5
1,504,592	+		BPHYT_RS26440	0.76	-1.0
1,504,763	+				-0.8
1,504,833	+				+0.2
1,504,833	+				+1.0
1,504,833	+				+0.4
1,504,834	-				-1.1
1,505,098	+		BPHYT_RS26445	0.15	-2.7
1,505,098	+		BPHYT_RS26445	0.15	+0.2
1,505,098	+		BPHYT_RS26445	0.15	-0.7
1,505,234	-		BPHYT_RS26445	0.29	-0.6
1,505,242	+		BPHYT_RS26445	0.30	-0.2
1,505,446	+		BPHYT_RS26445	0.51	+0.2
1,505,446	+		BPHYT_RS26445	0.51	+0.2
1,505,665	+		BPHYT_RS26445	0.73	+3.1
1,505,671	+		BPHYT_RS26445	0.73	+0.5
1,505,672	-		BPHYT_RS26445	0.73	+1.5
1,505,777	+		BPHYT_RS26445	0.84	-1.0