Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS24785

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,127,032	+		BPHYT_RS24775	0.88	-1.8
1,127,033	-		BPHYT_RS24775	0.89	-1.8
1,127,033	-		BPHYT_RS24775	0.89	+0.2
1,127,258	-				+0.7
1,127,429	-				+0.5
1,127,775	+		BPHYT_RS24780	0.42	-0.3
1,127,918	-				-0.8
1,128,029	-				+0.2
1,128,031	+				-0.4
1,128,032	-				+0.7
1,128,621	+		BPHYT_RS24785	0.79	-0.4
1,128,768	+				+0.2
1,128,886	-				-0.3
1,128,901	+				-1.4
1,129,258	+		BPHYT_RS24790	0.60	-0.1
1,129,400	+		BPHYT_RS24790	0.83	-0.8
1,129,400	+		BPHYT_RS24790	0.83	-1.2
1,129,400	+		BPHYT_RS24790	0.83	+1.5
1,129,483	+				-1.3
1,129,616	+				+2.5
1,129,696	+				+0.2
1,129,696	+				+1.2
1,129,715	-				-0.8