Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19805

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
4,455,967	-		BPHYT_RS19800	0.41	-3.1
4,456,049	-		BPHYT_RS19800	0.46	+0.0
4,456,149	-		BPHYT_RS19800	0.53	-0.6
4,456,149	-		BPHYT_RS19800	0.53	+1.1
4,456,445	+		BPHYT_RS19800	0.74	-2.2
4,456,565	+		BPHYT_RS19800	0.82	-0.2
4,456,565	+		BPHYT_RS19800	0.82	-0.9
4,456,566	-		BPHYT_RS19800	0.83	+0.4
4,456,922	-		BPHYT_RS19805	0.24	-0.6
4,457,239	+				+1.7
4,457,427	+				-1.3
4,457,428	-				+0.8
4,457,698	+		BPHYT_RS19810	0.22	-0.9
4,457,699	-		BPHYT_RS19810	0.22	-1.2
4,457,699	-		BPHYT_RS19810	0.22	-1.4
4,457,699	-		BPHYT_RS19810	0.22	-0.4
4,457,699	-		BPHYT_RS19810	0.22	-0.9
4,458,020	+				+0.5