Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS19740

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
4,441,637	+				+0.1
4,441,682	-				-1.1
4,441,751	+				+1.2
4,441,792	-		BPHYT_RS19735	0.12	-1.0
4,441,953	+		BPHYT_RS19735	0.60	+0.0
4,441,973	+		BPHYT_RS19735	0.66	+1.1
4,442,125	-				+0.1
4,442,125	-				+0.3
4,442,125	-				+0.8
4,442,128	+				-1.6
4,442,129	-				+0.3
4,442,129	-				-1.5
4,442,266	+				-1.0
4,442,343	+				-1.2
4,442,610	+		BPHYT_RS19740	0.12	+1.7
4,442,611	-		BPHYT_RS19740	0.13	+0.9
4,442,673	+		BPHYT_RS19740	0.24	-0.2
4,442,715	+		BPHYT_RS19740	0.32	+1.0
4,442,716	-		BPHYT_RS19740	0.32	+1.2
4,442,748	+		BPHYT_RS19740	0.38	+0.8
4,442,839	+		BPHYT_RS19740	0.55	+0.5
4,442,840	-		BPHYT_RS19740	0.55	+0.2
4,442,840	-		BPHYT_RS19740	0.55	+0.0
4,442,841	+		BPHYT_RS19740	0.55	-2.0
4,442,841	+		BPHYT_RS19740	0.55	+0.3
4,442,841	+		BPHYT_RS19740	0.55	+0.1
4,442,841	+		BPHYT_RS19740	0.55	+0.4
4,442,841	+		BPHYT_RS19740	0.55	-0.6
4,442,841	+		BPHYT_RS19740	0.55	-0.6
4,442,841	+		BPHYT_RS19740	0.55	-1.7
4,442,841	+		BPHYT_RS19740	0.55	+0.1
4,442,842	-		BPHYT_RS19740	0.55	+0.4
4,442,842	-		BPHYT_RS19740	0.55	+0.1
4,442,985	+		BPHYT_RS19740	0.81	+1.2
4,443,152	+				+0.8
4,443,211	-				-0.8
4,443,215	+				+0.2
4,443,216	-				+0.2
4,443,220	+				+1.1
4,443,220	+				+0.1
4,443,220	+				+0.3
4,443,220	+				-0.7
4,443,334	-				-0.1
4,443,617	-				-1.7
4,444,043	+				-2.0
4,444,043	+				-0.8
4,444,044	-				+0.8
4,444,044	-				-1.3
4,444,044	-				-1.6