Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS18660

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
4,195,105	+		BPHYT_RS18650	0.71	-1.4
4,195,106	-		BPHYT_RS18650	0.71	-0.1
4,195,106	-		BPHYT_RS18650	0.71	+1.6
4,195,286	-		BPHYT_RS18650	0.81	+0.2
4,195,535	-				-0.6
4,195,568	+				+0.5
4,195,568	+				-0.3
4,195,569	-				-0.2
4,195,569	-				-0.2
4,195,627	+				+0.1
4,195,627	+				-0.3
4,195,628	-				-0.2
4,195,628	-				+0.1
4,195,731	-		BPHYT_RS18655	0.12	+1.9
4,195,731	-		BPHYT_RS18655	0.12	+2.0
4,195,731	-		BPHYT_RS18655	0.12	+2.8
4,195,733	-		BPHYT_RS18655	0.12	+2.9
4,196,181	+		BPHYT_RS18660	0.66	-1.5
4,196,182	-		BPHYT_RS18660	0.66	-2.0
4,196,204	+		BPHYT_RS18660	0.74	-1.9
4,196,310	+				+0.1
4,196,329	-				-0.6
4,196,360	+				+0.3
4,196,360	+				+0.0
4,196,360	+				-0.1
4,196,360	+				-0.9
4,196,360	+				-0.3
4,196,361	-				-0.2
4,196,361	-				+3.4
4,196,366	+				+1.8
4,196,367	-				-1.2
4,196,367	-				+0.2
4,196,444	-				+0.2
4,196,444	-				+0.3
4,196,447	+				+0.1
4,196,448	-				-2.0
4,196,448	-				-0.3
4,196,448	-				-0.4
4,196,628	+		BPHYT_RS18665	0.13	+0.1
4,196,628	+		BPHYT_RS18665	0.13	+1.1
4,196,629	-		BPHYT_RS18665	0.13	-0.9
4,196,629	-		BPHYT_RS18665	0.13	-0.1
4,196,895	+		BPHYT_RS18665	0.36	-0.3
4,196,896	-		BPHYT_RS18665	0.36	-0.3
4,196,896	-		BPHYT_RS18665	0.36	+1.3
4,196,896	-		BPHYT_RS18665	0.36	+0.1
4,196,896	-		BPHYT_RS18665	0.36	-0.4
4,197,105	+		BPHYT_RS18665	0.54	+1.1
4,197,105	+		BPHYT_RS18665	0.54	+0.3
4,197,262	-		BPHYT_RS18665	0.67	+1.0
4,197,262	-		BPHYT_RS18665	0.67	+1.9