Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS17435

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,948,716	-				-0.2
3,949,106	+		BPHYT_RS17430	0.39	-1.8
3,949,107	-		BPHYT_RS17430	0.39	-0.8
3,949,107	-		BPHYT_RS17430	0.39	-1.0
3,949,331	+		BPHYT_RS17430	0.70	-1.8
3,949,332	-		BPHYT_RS17430	0.70	-0.8
3,949,383	-		BPHYT_RS17430	0.77	-0.9
3,949,641	+				-0.1
3,949,642	-				-0.7
3,950,861	-				+1.0
3,950,862	+				-1.3
3,951,108	+		BPHYT_RS17440	0.42	+0.2
3,951,108	+		BPHYT_RS17440	0.42	-1.3
3,951,108	+		BPHYT_RS17440	0.42	-1.4
3,951,180	-		BPHYT_RS17440	0.62	-0.3
3,951,308	+				-2.0
3,951,309	-				-2.0
3,951,309	-				-0.1
3,951,364	+				+0.7
3,951,365	-				-0.5
3,951,386	+				+1.0
3,951,387	-				+1.7
3,951,614	-				+1.6