Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS16625

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,766,641	+		BPHYT_RS16625	0.18	-0.2
3,766,641	+		BPHYT_RS16625	0.18	+1.1
3,766,641	+		BPHYT_RS16625	0.18	-0.9
3,766,642	-		BPHYT_RS16625	0.18	+0.5
3,766,798	+		BPHYT_RS16625	0.35	-0.8
3,766,798	+		BPHYT_RS16625	0.35	-0.4
3,766,983	-		BPHYT_RS16625	0.55	+2.5
3,766,983	-		BPHYT_RS16625	0.55	-1.4
3,766,983	-		BPHYT_RS16625	0.55	-1.7
3,767,099	+		BPHYT_RS16625	0.67	+0.4
3,767,099	+		BPHYT_RS16625	0.67	+0.4
3,767,099	+		BPHYT_RS16625	0.67	+0.1
3,767,099	+		BPHYT_RS16625	0.67	-1.0
3,767,100	-		BPHYT_RS16625	0.67	-1.7
3,767,100	-		BPHYT_RS16625	0.67	-0.7
3,767,187	+		BPHYT_RS16625	0.76	-1.8
3,767,188	-		BPHYT_RS16625	0.76	+0.2
3,767,276	+		BPHYT_RS16625	0.86	-0.4
3,767,395	-				-0.6
3,767,409	-				+0.3
3,767,479	-				-0.0
3,767,727	+		BPHYT_RS16630	0.21	+0.1
3,767,727	+		BPHYT_RS16630	0.21	+0.2
3,767,727	+		BPHYT_RS16630	0.21	-0.2
3,767,728	-		BPHYT_RS16630	0.21	-0.4
3,767,732	-		BPHYT_RS16630	0.21	-2.2
3,767,866	-		BPHYT_RS16630	0.41	+0.5
3,767,866	-		BPHYT_RS16630	0.41	+5.6
3,767,866	-		BPHYT_RS16630	0.41	+0.3
3,767,932	-		BPHYT_RS16630	0.51	-0.0
3,767,932	-		BPHYT_RS16630	0.51	-1.1
3,767,932	-		BPHYT_RS16630	0.51	+0.0
3,767,965	+		BPHYT_RS16630	0.56	-0.1
3,767,989	-		BPHYT_RS16630	0.60	+1.1