Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15175

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,452,564	+		BPHYT_RS15170	0.45	+0.8
3,452,832	+		BPHYT_RS15170	0.61	+0.8
3,452,898	-		BPHYT_RS15170	0.64	-0.2
3,452,898	-		BPHYT_RS15170	0.64	-0.3
3,452,943	-		BPHYT_RS15170	0.67	+1.4
3,453,805	+		BPHYT_RS15175	0.17	+0.4
3,454,117	+		BPHYT_RS15175	0.36	+0.6
3,454,117	+		BPHYT_RS15175	0.36	+0.0
3,454,651	-		BPHYT_RS15175	0.67	+1.3
3,454,672	+		BPHYT_RS15175	0.68	+1.7
3,454,746	-		BPHYT_RS15175	0.72	+1.3
3,454,746	-		BPHYT_RS15175	0.72	-0.5
3,454,746	-		BPHYT_RS15175	0.72	+1.6
3,454,865	+		BPHYT_RS15175	0.79	+0.8
3,454,865	+		BPHYT_RS15175	0.79	+1.4
3,454,866	-		BPHYT_RS15175	0.79	+0.2
3,454,923	+		BPHYT_RS15175	0.83	+0.3
3,454,934	-		BPHYT_RS15175	0.83	+0.9
3,455,154	+				+1.1
3,455,164	+				+0.5
3,455,164	+				+0.5
3,455,164	+				+2.9
3,455,165	-				-1.2
3,455,165	-				-0.2
3,455,301	+		BPHYT_RS15180	0.13	+1.1
3,455,302	-		BPHYT_RS15180	0.13	+1.3
3,455,302	-		BPHYT_RS15180	0.13	+0.9
3,455,320	-		BPHYT_RS15180	0.16	+1.5
3,455,358	+		BPHYT_RS15180	0.22	+1.2
3,455,419	+		BPHYT_RS15180	0.31	-0.1
3,455,419	+		BPHYT_RS15180	0.31	+0.0
3,455,420	-		BPHYT_RS15180	0.31	+0.0
3,456,132	-				+0.2
3,456,132	-				+0.6