Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS15090

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,434,258	-		BPHYT_RS15085	0.78	-0.1
3,434,482	+		BPHYT_RS15085	0.87	+0.9
3,434,866	+				-0.1
3,434,867	-				-0.8
3,434,867	-				-0.3
3,434,867	-				+0.1
3,435,255	+		BPHYT_RS15090	0.37	-0.1
3,435,260	+		BPHYT_RS15090	0.37	-0.9
3,435,594	+		BPHYT_RS15090	0.70	-2.0
3,435,598	+		BPHYT_RS15090	0.71	-1.0
3,435,598	+		BPHYT_RS15090	0.71	-0.7
3,435,599	-		BPHYT_RS15090	0.71	-0.8
3,435,599	-		BPHYT_RS15090	0.71	-1.9
3,435,599	-		BPHYT_RS15090	0.71	+1.5
3,435,985	+				-0.1
3,435,986	-				+0.5
3,435,986	-				+0.7
3,436,051	+				+0.1
3,436,051	+				+0.9
3,436,051	+				+0.3
3,436,051	+				+2.2
3,436,058	-				-0.9
3,436,154	+		BPHYT_RS15095	0.17	-1.7
3,436,154	+		BPHYT_RS15095	0.17	-0.3
3,436,155	-		BPHYT_RS15095	0.17	-0.8
3,436,191	-		BPHYT_RS15095	0.20	-1.2
3,436,191	-				+1.3
3,436,193	+		BPHYT_RS15095	0.20	-0.2
3,436,193	+		BPHYT_RS15095	0.20	-0.5
3,436,250	+		BPHYT_RS15095	0.26	+0.9
3,436,251	-		BPHYT_RS15095	0.26	-1.0
3,436,428	+		BPHYT_RS15095	0.43	+0.2
3,436,428	+		BPHYT_RS15095	0.43	+1.2
3,436,485	-		BPHYT_RS15095	0.48	-1.1
3,436,625	+		BPHYT_RS15095	0.61	-0.5
3,436,865	+		BPHYT_RS15095	0.84	-1.6
3,436,880	+		BPHYT_RS15095	0.85	+2.4