Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13735

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
3,129,465	-				-1.1
3,129,670	-		BPHYT_RS13730	0.17	-0.6
3,129,672	+		BPHYT_RS13730	0.18	-0.3
3,129,673	-		BPHYT_RS13730	0.18	+0.2
3,129,673	-		BPHYT_RS13730	0.18	-1.2
3,129,673	-		BPHYT_RS13730	0.18	+0.5
3,129,775	+		BPHYT_RS13730	0.50	-0.2
3,129,873	+		BPHYT_RS13730	0.80	+1.1
3,129,933	+				-0.7
3,129,964	-				-0.8
3,130,153	+		BPHYT_RS13735	0.13	-2.0
3,130,522	+		BPHYT_RS13735	0.41	-1.1
3,130,564	+		BPHYT_RS13735	0.45	+1.0
3,130,577	-		BPHYT_RS13735	0.46	-0.2
3,130,597	+		BPHYT_RS13735	0.47	-0.3
3,130,699	+		BPHYT_RS13735	0.55	+2.6
3,130,873	+		BPHYT_RS13735	0.68	-0.6
3,130,874	-		BPHYT_RS13735	0.68	-0.4
3,131,318	+				-0.2
3,131,319	-				+0.7
3,131,383	+				+1.6
3,131,384	-				-0.3
3,131,386	-				+0.6
3,131,386	-				+0.6
3,131,410	-				-0.9
3,131,410	-				+1.9
3,131,432	-				+0.3
3,131,432	-				+0.8
3,131,435	-				+1.1
3,132,044	+				+0.6
3,132,081	-		BPHYT_RS13745	0.13	+2.7
3,132,267	+		BPHYT_RS13745	0.48	-0.0
3,132,267	+		BPHYT_RS13745	0.48	-0.6
3,132,269	+		BPHYT_RS13745	0.48	-0.4
3,132,269	+		BPHYT_RS13745	0.48	+1.2
3,132,270	-		BPHYT_RS13745	0.49	+0.1
3,132,270	-		BPHYT_RS13745	0.49	-3.5