Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13130

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,999,218	-		BPHYT_RS13125	0.55	+1.6
2,999,316	+		BPHYT_RS13125	0.65	+0.9
2,999,316	+		BPHYT_RS13125	0.65	-0.6
2,999,317	-		BPHYT_RS13125	0.65	-1.3
2,999,487	+		BPHYT_RS13125	0.81	-0.5
2,999,683	-				+0.1
2,999,712	+				+0.4
2,999,713	-				-0.4
2,999,949	+		BPHYT_RS13130	0.26	-1.7
3,000,495	+				+1.0
3,000,495	+				-1.0
3,000,496	-				-0.1
3,000,717	-		BPHYT_RS13135	0.31	+0.1
3,000,967	-		BPHYT_RS13135	0.82	+0.1
3,000,968	+		BPHYT_RS13135	0.82	+1.0
3,000,969	-		BPHYT_RS13135	0.83	-1.2
3,001,041	+				+0.1
3,001,068	-				+0.5