Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11985

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,727,232	+		BPHYT_RS11980	0.57	+1.4
2,727,258	+		BPHYT_RS11980	0.59	+2.5
2,727,536	-		BPHYT_RS11980	0.86	-0.2
2,727,762	+				+0.8
2,728,022	+		BPHYT_RS11985	0.30	+0.5
2,728,601	+				-0.7
2,728,602	-				-0.1
2,728,609	+				+0.7
2,728,782	+				+1.2
2,728,790	+				-0.1
2,728,790	+				-0.3
2,728,791	-				-1.2
2,728,791	-				+0.8
2,728,928	-		BPHYT_RS11990	0.13	-0.2
2,729,245	+		BPHYT_RS11990	0.56	-1.3
2,729,500	-		BPHYT_RS11990	0.90	-1.2