Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11480

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,609,687	-		BPHYT_RS11475	0.43	+1.1
2,609,687	-		BPHYT_RS11475	0.43	+1.2
2,609,687	-		BPHYT_RS11475	0.43	+2.5
2,609,748	-		BPHYT_RS11475	0.48	-1.9
2,609,815	+		BPHYT_RS11475	0.53	+3.1
2,609,816	-		BPHYT_RS11475	0.53	+0.2
2,609,858	+		BPHYT_RS11475	0.57	-0.8
2,610,086	-		BPHYT_RS11475	0.76	+2.2
2,610,478	+				-0.1
2,610,478	+				-1.0
2,610,536	-				+1.5
2,610,634	+				-0.5
2,610,723	-				+1.2
2,611,055	-		BPHYT_RS11480	0.26	+2.5
2,611,072	+		BPHYT_RS11480	0.28	+1.5
2,611,073	-		BPHYT_RS11480	0.28	-0.9
2,611,507	+		BPHYT_RS11480	0.55	+1.2
2,611,529	-		BPHYT_RS11480	0.56	-1.7
2,612,169	-				-0.7
2,612,169	-				-0.9
2,612,208	-				+0.9
2,612,948	+		BPHYT_RS11485	0.60	-0.0
2,613,167	+		BPHYT_RS11485	0.80	-0.2