Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11285

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,561,858	-				+0.3
2,561,902	+				+0.9
2,561,902	+				-1.5
2,561,903	-				+0.8
2,561,903	-				+0.3
2,561,903	-				+3.3
2,561,903	-				-0.1
2,561,998	-		BPHYT_RS11280	0.20	+2.5
2,562,406	+		BPHYT_RS11280	0.70	-0.9
2,562,406	+		BPHYT_RS11280	0.70	+0.1
2,562,469	+		BPHYT_RS11280	0.78	-1.0
2,562,470	-		BPHYT_RS11280	0.78	-1.2
2,562,588	+				+2.5
2,562,632	+				-0.9
2,562,646	-				+0.8
2,562,788	+				-0.8
2,562,799	+				-1.8
2,562,800	-				-0.6
2,563,315	+		BPHYT_RS11285	0.54	-0.1
2,563,437	+		BPHYT_RS11285	0.66	-0.3
2,563,952	+		BPHYT_RS11290	0.13	+0.2
2,564,288	-		BPHYT_RS11290	0.47	-0.8
2,564,288	-		BPHYT_RS11290	0.47	-0.9