Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11125
Experiment: 36hr PHYTO4 MOI 1
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | 36hr PHYTO4 MOI 1 |
|---|---|---|---|---|---|
| remove | |||||
| 2,528,002 | + | +1.5 | |||
| 2,528,003 | - | +0.9 | |||
| 2,528,003 | - | +0.9 | |||
| 2,528,243 | - | -1.6 | |||
| 2,528,369 | - | BPHYT_RS11125 | 0.34 | -1.1 | |
| 2,528,823 | + | -0.8 | |||
| 2,528,920 | - | BPHYT_RS11130 | 0.14 | -0.7 |
Or see this region's nucleotide sequence