Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS10575

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,409,039	-		BPHYT_RS10570	0.87	+0.3
2,409,250	+				-0.7
2,409,251	-				+1.1
2,409,296	-				-2.0
2,409,767	+		BPHYT_RS10575	0.49	-2.6
2,409,768	-		BPHYT_RS10575	0.49	-1.0
2,409,768	-		BPHYT_RS10575	0.49	-1.2
2,409,768	-		BPHYT_RS10575	0.49	-0.5
2,409,768	-		BPHYT_RS10575	0.49	-1.2
2,410,056	+				-1.2
2,410,057	-				-0.2
2,410,057	-				+0.7
2,410,057	-				-1.4
2,410,081	+				+0.3
2,410,127	-				+0.3
2,410,127	-				+0.4
2,410,240	+				-0.2
2,410,241	-				-0.7
2,410,279	+		BPHYT_RS10580	0.12	-0.0
2,410,662	+		BPHYT_RS10580	0.33	+1.2
2,410,662	+		BPHYT_RS10580	0.33	-0.0
2,410,662	+		BPHYT_RS10580	0.33	-0.9
2,410,663	-		BPHYT_RS10580	0.33	+0.6
2,410,933	+		BPHYT_RS10580	0.47	-0.3