Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS09070

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
2,051,884	+				-1.4
2,052,571	+				+0.3
2,052,903	+		BPHYT_RS09070	0.52	-0.6
2,052,903	+		BPHYT_RS09070	0.52	-1.5
2,052,904	-		BPHYT_RS09070	0.52	-0.6
2,053,056	+		BPHYT_RS09070	0.77	-1.4
2,053,057	-		BPHYT_RS09070	0.78	-0.6
2,053,057	-		BPHYT_RS09070	0.78	-0.5
2,053,137	+				-0.9
2,053,220	+				+0.7
2,053,220	+				-1.0
2,053,221	-				-0.5
2,053,252	+				+0.2
2,053,252	+				-1.2
2,053,253	-				+0.5
2,053,253	-				+0.3
2,053,313	+				-0.6
2,053,402	+				-0.3
2,053,472	-				+0.5
2,053,930	+		BPHYT_RS09075	0.40	-0.8
2,053,931	-		BPHYT_RS09075	0.41	+0.7
2,053,931	-		BPHYT_RS09075	0.41	-0.0
2,054,081	+		BPHYT_RS09075	0.53	-0.7
2,054,124	-		BPHYT_RS09075	0.56	-0.0
2,054,132	+		BPHYT_RS09075	0.57	+0.4
2,054,132	+		BPHYT_RS09075	0.57	+0.3
2,054,133	-		BPHYT_RS09075	0.57	+0.3
2,054,133	-		BPHYT_RS09075	0.57	-0.9
2,054,186	-		BPHYT_RS09075	0.61	-2.1
2,054,188	+		BPHYT_RS09075	0.61	+0.5
2,054,188	+		BPHYT_RS09075	0.61	-2.0
2,054,189	-		BPHYT_RS09075	0.61	+0.7