Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS08630

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,966,400	-		BPHYT_RS08625	0.31	+2.1
1,966,956	+				+0.7
1,967,121	-				+0.2
1,967,310	-		BPHYT_RS08630	0.21	-0.9
1,967,405	+		BPHYT_RS08630	0.29	-0.8
1,967,406	-		BPHYT_RS08630	0.29	-0.8
1,967,595	-		BPHYT_RS08630	0.46	-0.7
1,967,639	+		BPHYT_RS08630	0.50	-1.6
1,967,640	-		BPHYT_RS08630	0.50	-0.6
1,967,660	+		BPHYT_RS08630	0.52	-0.8
1,967,660	+		BPHYT_RS08630	0.52	-1.4
1,967,661	-		BPHYT_RS08630	0.52	-0.4
1,968,771	+				+1.5
1,968,792	+				-0.0
1,968,793	-				+0.2
1,968,793	-				-0.8
1,968,793	-				-1.2
1,968,793	-				-1.0
1,968,793	-				-0.6
1,968,794	+				+0.4
1,968,794	+				+0.0
1,968,795	-				-1.1
1,968,795	-				-0.6
1,968,795	-				+0.2
1,968,796	+				-0.5
1,968,796	+				-0.5
1,968,796	+				+1.0
1,968,796	+				+1.3
1,968,797	-				-0.4
1,968,797	-				-1.0
1,968,797	-				-0.4
1,968,798	+				+1.3
1,968,799	-				-1.1
1,968,805	-				+1.9
1,968,805	-				-0.5
1,968,847	+				-0.0
1,968,879	+				+0.2
1,969,192	+				-1.2