Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07415

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,686,349	-				+1.0
1,686,507	+		BPHYT_RS07410	0.89	-1.8
1,686,508	-		BPHYT_RS07410	0.89	+0.4
1,687,059	-				+0.7
1,687,138	+		BPHYT_RS07415	0.13	-0.6
1,687,138	+		BPHYT_RS07415	0.13	+0.8
1,687,138	+		BPHYT_RS07415	0.13	+1.5
1,687,139	-		BPHYT_RS07415	0.13	+0.5
1,687,435	-				+0.3
1,687,572	-		BPHYT_RS07420	0.70	+0.4
1,688,010	-				-1.6
1,688,099	-		BPHYT_RS07425	0.21	+0.2
1,688,360	-		BPHYT_RS07425	0.54	+0.7