Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS07405

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,683,480	-		BPHYT_RS07400	0.69	-1.5
1,683,698	+				-0.7
1,683,698	+				-1.8
1,683,698	+				+0.3
1,683,699	-				+0.1
1,683,858	-				+0.1
1,684,194	+		BPHYT_RS07405	0.38	-0.9
1,684,416	+		BPHYT_RS07405	0.60	+0.4
1,684,609	-		BPHYT_RS07405	0.79	+1.6
1,684,610	+		BPHYT_RS07405	0.79	-0.9
1,684,610	+		BPHYT_RS07405	0.79	-0.3
1,684,822	-				-0.2
1,685,570	-		BPHYT_RS07410	0.38	-1.6