Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS06710

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,519,839	+				+0.4
1,519,846	+				+0.7
1,520,362	+				-0.3
1,520,403	+				+0.9
1,520,404	-				+1.1
1,520,404	-				-0.9
1,520,490	-				+1.2
1,520,609	+				-1.4
1,520,890	+		BPHYT_RS06710	0.70	-1.5
1,521,161	+				+0.6
1,521,207	+		BPHYT_RS06715	0.12	+0.5
1,521,292	-		BPHYT_RS06715	0.19	-0.2
1,521,404	-		BPHYT_RS06715	0.28	+0.1
1,521,404	-		BPHYT_RS06715	0.28	-0.2
1,521,517	+		BPHYT_RS06715	0.38	-0.7
1,521,517	+		BPHYT_RS06715	0.38	+0.2
1,521,518	-				+1.5
1,521,518	-		BPHYT_RS06715	0.38	+0.1
1,521,518	-		BPHYT_RS06715	0.38	+1.5
1,521,676	-		BPHYT_RS06715	0.51	+0.2
1,521,772	+		BPHYT_RS06715	0.59	-0.7
1,521,773	-		BPHYT_RS06715	0.59	-0.8
1,521,773	-		BPHYT_RS06715	0.59	-0.7
1,521,782	-		BPHYT_RS06715	0.60	-1.9