Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05665

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,292,900	+		BPHYT_RS05655	0.63	+0.2
1,293,097	+		BPHYT_RS05655	0.89	-0.8
1,293,097	+		BPHYT_RS05655	0.89	-0.5
1,293,116	+				-2.3
1,293,306	+				-0.0
1,293,622	-				-0.6
1,293,649	-				-1.0
1,293,716	-				-1.0
1,293,716	-				+0.9
1,293,737	-				-0.8
1,293,737	-				-2.3
1,293,810	-		BPHYT_RS05665	0.13	-1.0
1,293,918	+		BPHYT_RS05665	0.22	-0.9
1,294,032	-		BPHYT_RS05665	0.33	+0.6
1,294,032	-		BPHYT_RS05665	0.33	-0.1
1,294,207	+		BPHYT_RS05665	0.49	+0.1
1,294,208	-				+3.6
1,294,552	-		BPHYT_RS05665	0.80	+0.1
1,294,706	+				-0.4
1,294,707	-				+0.2
1,294,714	+				+3.1
1,294,754	-				-1.6
1,294,756	+				+0.2
1,294,785	+				+0.2
1,294,786	-				-0.1
1,295,274	-		BPHYT_RS05670	0.35	-0.1
1,295,291	-		BPHYT_RS05670	0.37	+0.7
1,295,324	-		BPHYT_RS05670	0.39	+0.4
1,295,432	-		BPHYT_RS05670	0.49	+1.6
1,295,607	-		BPHYT_RS05670	0.64	-0.4