Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS05430

Experiment: 36hr PHYTO4 MOI 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	36hr PHYTO4 MOI 1
1,246,394	+		BPHYT_RS05425	0.70	+1.5
1,246,527	+		BPHYT_RS05425	0.76	-0.0
1,246,529	+		BPHYT_RS05425	0.77	-0.4
1,246,627	+		BPHYT_RS05425	0.81	-0.0
1,246,833	+				-0.6
1,246,834	-				+0.1
1,247,220	+				+2.0
1,247,397	+		BPHYT_RS05430	0.13	+1.7
1,247,481	+		BPHYT_RS05430	0.19	-0.0
1,247,481	+		BPHYT_RS05430	0.19	-0.8
1,247,620	-		BPHYT_RS05430	0.29	+2.2
1,247,712	+		BPHYT_RS05430	0.35	-2.2
1,247,716	+		BPHYT_RS05430	0.35	-0.5
1,247,717	-		BPHYT_RS05430	0.36	+0.7
1,247,717	-		BPHYT_RS05430	0.36	+1.1
1,247,717	-		BPHYT_RS05430	0.36	-1.1
1,247,920	+		BPHYT_RS05430	0.50	-0.2
1,248,047	-		BPHYT_RS05430	0.59	+1.0
1,248,391	+		BPHYT_RS05430	0.83	-2.5
1,248,391	+		BPHYT_RS05430	0.83	-0.4
1,248,445	+		BPHYT_RS05430	0.87	-1.3
1,248,779	-				+0.8
1,248,965	+				-0.2
1,248,999	+				+0.6
1,249,261	+		BPHYT_RS05435	0.18	-0.5
1,249,271	+		BPHYT_RS05435	0.19	-1.3
1,249,321	+		BPHYT_RS05435	0.24	-1.3
1,249,542	+		BPHYT_RS05435	0.43	-1.5
1,249,566	-		BPHYT_RS05435	0.45	-0.7